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NCERT Exemplar · Q51

Q.There is only one possible sequence of amino acids when deduced from a given nucleotides. But multiple nucleotides sequence can be deduced from a single amino acid sequence. Explain this phenomena.

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The genetic code is degenerate — multiple codons can specify the same amino acid — so while a protein's amino acid sequence can be translated back into many possible DNA sequences, the reverse (DNA to protein) is uniquely determined.

This question touches on a fundamental asymmetry in the flow of genetic information — the relationship between nucleic acids and proteins is not a two-way street. To understand why, we need to look closely at how the genetic code works.

The central dogma of molecular biology tells us that DNA is transcribed into mRNA, and mRNA is translated into protein. During translation, the mRNA sequence is read in groups of three nucleotides called codons. Each codon specifies one amino acid. There are 64 possible codons (4³) but only 20 standard amino acids. This means that most amino acids are encoded by more than one codon. For example, the amino acid leucine is specified by six different codons: UUA, UUG, CUU, CUC, CUA, and CUG. This property is called the degeneracy of the genetic code.

Now, consider the two directions of this mapping. When you have a given nucleotide sequence — say, a stretch of mRNA — the ribosome reads it codon by codon, and each codon unambiguously points to one amino acid. There is no ambiguity here: UUU always means phenylalanine, GGU always means glycine, and so on. So from a given DNA or mRNA sequence, the amino acid sequence is fixed and unique.

But reverse the process. Suppose you have a protein with the amino acid sequence — let's say — alanine–glycine–serine. How many different mRNA sequences could code for that? Alanine has four codons (GCU, GCC, GCA, GCG), glycine has four (GGU, GGC, GGA, GGG), and serine has six (UCU, UCC, UCA, UCG, AGU, AGC). Multiply these possibilities: 4 × 4 × 6 = 96 different mRNA sequences that would all produce exactly the same tripeptide. And if you consider the DNA that codes for it (remembering that DNA uses T instead of U), the number of possible sequences is even larger because the coding strand can be either of the two DNA strands.

Note

This degeneracy is not random. Many mutations at the third nucleotide of a codon do not change the amino acid at all, because that position is often the one that varies among a given amino acid's several codons — so the protein's function is preserved. This is why the code is often described as "degenerate but not ambiguous." …

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