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Botany · Ch 6 — Cell: The Unit of Life

Staining Techniques

6.9.3

Staining Techniques

Staining is one of the most important practical techniques in cell biology, because it is often the only way to actually see different components of a cell clearly at all - each part of the cell has a different chemical affinity for different dyes, and the general technique of deliberately staining cells and tissues to reveal this difference is called histochemical staining, or histochemistry. In practice, a fixed set of well-established stains is routinely used, because each one has become closely associated with revealing one particular cell component: eosin stains the cytoplasm and cellulose pink or red; acetocarmine and haematoxylin both stain the nucleus and chromosomes pink or red; methylene blue stains the nucleus blue; safranine stains lignified cell walls red; cotton blue stains fungal hyphae blue; Sudan IV and Sudan Black stain lipids scarlet-red or black respectively; Coomassie brilliant blue stains protein blue; Janus Green specifically stains mitochondria a greenish-blue; I2KI (iodine-potassium iodide solution) stains starch a bluish-black to brown colour; and toluidine blue stains xylem, parenchyma and epidermal tissue blue or greenish-blue. Choosing the right stain for the struct …

Table ~6.9.3Common stains used in Histochemistry
S.NoStainColour of stainingAffinity
1EosinPink, RedCytoplasm, cellulose
2Acetocarmine / HaematoxylinPink / RedNucleus, Chromosomes
3Methylene BlueBlueNucleus
4SaffranineRedCell wall (Lignin)
5Cotton blueBlueFungal Hyphae
6Sudan IV, Sudan BlackScarlet Red/BlackLipids
7Coomasie brilliant BlueBlueProtein
8Janus GreenGreenish BlueMitochondria