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NCERT Exemplar · Q27

Q.Do biomolecules (DNA, protein) exhibit biological activity in anhydrous conditions?

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No -- biomolecules such as DNA and proteins do not show real biological activity in truly anhydrous (water-free) conditions, because the native, functional three-dimensional shape of both depends on weak, non-covalent interactions that only form and hold in the presence of water.

Biological activity -- an enzyme catalysing a reaction, a DNA molecule being read or replicated, a protein binding its target -- is never just about having the right atoms present. It depends on the molecule holding a very specific three-dimensional shape, the native conformation. That shape is not held together by strong covalent bonds alone; it is stabilised by a network of weak interactions: hydrogen bonds, hydrophobic interactions, van der Waals forces and electrostatic (ionic) interactions. Every one of these weak forces is mediated by water.

Consider a protein first. Its polypeptide chain folds into a precise tertiary structure because hydrophobic side chains cluster away from water on the inside, while hydrogen bonds form both within the chain and with the surrounding water shell that coats the molecule's surface. Remove the water completely, and this entire scaffold collapses: hydrophobic residues have nothing to hide from, hydrogen-bond geometry is disrupted, and the protein loses its native fold. An enzyme's active site is a precise three-dimensional pocket built from exactly this kind of folding -- once the fold is gone, substrate binding and catalysis stop.

DNA tells the same story. The double helix is held together by hydrogen bonds between complementary base pairs and by base-stacking interactions, but the sugar-phosphate backbone also carries a shell of hydration -- ordered water molecules that stabilise the helix's precise geometry. Strip that hydration shell away entirely, and the helix distorts; the regular geometry that DNA polymerase, RNA polymerase and other DNA-binding proteins recognise is no longer presented correctly, so replication, transcription and other DNA-dependent processes cannot proceed normally. …

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