Skip to content
Exercises · 5.3

Q.If the sequence of one strand of DNA is written as follows: 5'-ATGCATGCATGCATGCATGCATGCATGC-3'. Write down the sequence of complementary strand in 5' → 3' direction.

Uttarakhand UbseTextbookSubjective· 2mImportance★★★★★
3% · 3/96 Questions
✓ Free question

The complementary strand runs antiparallel, so reading 5' → 3' it is: 5'-GCATGCATGCATGCATGCATGCATGCAT-3'.


DNA's double helix is held together by two strands that run in opposite directions—what we call antiparallel orientation. One strand runs 5' to 3' in one direction, and its partner runs 3' to 5' in the same spatial direction, which means 5' to 3' when you flip your perspective. This antiparallel arrangement is fundamental to how DNA replicates and how enzymes read genetic information.

The base-pairing rules discovered by Chargaff are simple and absolute: adenine (A) pairs with thymine (T), and guanine (G) pairs with cytosine (C). These pairs are held by hydrogen bonds—two between A and T, three between G and C—and they fit together like puzzle pieces because of their complementary shapes.

Given the strand 5'-ATGCATGCATGCATGCATGCATGCATGC-3', you first write its complement by applying the pairing rules base by base:

  • A pairs with T
  • T pairs with A
  • G pairs with C
  • C pairs with G

So the complement, written in the same left-to-right direction as the original, would be:

3'-TACGTACGTACGTACGTACGTACGTACG-5'

But the question asks for the complementary strand in the 5' → 3' direction. Since the strand above runs 3' → 5', you simply reverse the order of the bases to read it from the 5' end:

5'-GCATGCATGCATGCATGCATGCATGCAT-3'

Note

Notice the symmetry here—the original sequence is a repeating ATGC motif, and the complement is a repeating GCAT motif (the same 4-base repeat, just cyclically shifted). This is a tandem-repeat pattern, not a true palindrome—a real DNA palindrome would need the sequence to be identical to its own reverse complement, which this one is not, even though the repeating motif makes both strands look similarly patterned.

Important

Always remember: the two strands of DNA are antiparallel. When you write a complementary strand in the 5' → 3' direction, you are effectively reading the complement backwards relative to the original strand.


✓Final answer

The complementary strand, written in the 5' → 3' direction, is 5'-GCATGCATGCATGCATGCATGCATGCAT-3'. The antiparallel nature of DNA means this strand runs in the opposite direction to the original, with each base paired according to Chargaff's rules.

Unlock everything free for 14 days

  • Full step-by-step solutions
  • Concept-first explanations
  • Methods, shortcuts & mistakes
  • PYQ mapping + timed mock tests

Full access for 14 days. No credit card required.