Botany · Ch 4 — Principles and Processes of Biotechnology
DNA Ligase
DNA Ligase
DNA ligase is the enzyme that finishes what a restriction enzyme starts: after two DNA ends (say, a vector and a foreign insert, both cut by the same restriction enzyme) have found each other and their complementary sticky ends have base-paired, there is still a physical break - a 'nick' - in the sugar-phosphate backbone on each strand. DNA ligase seals that nick permanently by forming a new phosphodiester bond between a free 5'-phosphate group on one side and a free 3'-hydroxyl group on the other, consuming ATP as the energy source for the reaction. Without this sealing step, the DNA would simply fall back apart the moment the weak, temporary base-pairing at the sticky ends came undone; ligase is what converts a loosely associated pair of DNA pieces into one continuous, stable, covalently joined molecule. The enzyme used for this …
What this figure shows. A close-up chemical diagram of two adjacent DNA strand ends at a nick in the sugar-phosphate backbone - one strand ending in a free 3'-OH group, the other beginning with a free 5'-phosphate - with DNA ligase (using ATP or NAD+ as an energy source, releasing AMP and PPi/2Pi) catalysing formation of a new 3'-5' phosphodiester bond that seals …